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suitesparse : ver bump

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blue-devil
2020-06-10 00:23:51 +03:00
parent d7e0c4e376
commit bf328b70e3
4 changed files with 48 additions and 269 deletions
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science/mathematics/SuiteSparse/actions.py
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@@ -4,260 +4,20 @@
# Licensed under the GNU General Public License, version 3.
# See the file http://www.gnu.org/licenses/gpl.txt
from pisi.actionsapi import autotools
from pisi.actionsapi import get
from pisi.actionsapi import pisitools
from pisi.actionsapi import shelltools
amd_version = "2.3.1"
amd_version_major = "2"
btf_version = "1.2.0"
btf_version_major = "1"
camd_version = "2.3.1"
camd_version_major = "2"
ccolamd_version = "2.8.0"
ccolamd_version_major = "2"
cholmod_version = "2.0.1"
cholmod_version_major = "2"
colamd_version = "2.8.0"
colamd_version_major = "2"
csparse_version = "3.1.1"
csparse_version_major = "3"
klu_version = "1.2.1"
klu_version_major = "1"
ldl_version = "2.1.0"
ldl_version_major = "2"
umfpack_version = "5.6.1"
umfpack_version_major = "5"
spqr_version = "1.3.1"
spqr_version_major = "1"
rbio_version = "2.1.1"
rbio_version_major = "2"
SuiteSparse_config_ver = "4.2.0"
SuiteSparse_config_major = "4"
shelltools.export("JOBS", get.makeJOBS().replace("-j", ""))
def build():
shelltools.export("CFLAGS","%s -fPIC -O3" % get.CFLAGS())
for d in ("AMD", "BTF", "CAMD", "CCOLAMD", "CHOLMOD", "COLAMD", "CSparse", "KLU", "LDL", "UMFPACK", "SPQR", "RBio"):
shelltools.makedirs("Doc/%s" % d)
shelltools.makedirs("Include")
shelltools.makedirs("Lib")
shelltools.cd("SuiteSparse_config")
autotools.make()
shelltools.system("ar x libsuitesparseconfig.a")
shelltools.cd("../Lib")
shelltools.system("gcc -shared -Wl,-soname,libsuitesparseconfig.so.%s -o \
libsuitesparseconfig.so.%s ../SuiteSparse_config/*.o" % (SuiteSparse_config_major, SuiteSparse_config_ver))
shelltools.sym("libsuitesparseconfig.so.%s" % SuiteSparse_config_ver, "libsuitesparseconfig.so.%s" % SuiteSparse_config_major)
shelltools.sym("libsuitesparseconfig.so.%s" % SuiteSparse_config_ver, "libsuitesparseconfig.so")
shelltools.copy("../SuiteSparse_config/*.a", ".")
shelltools.cd("../SuiteSparse_config")
shelltools.copy("*.h", "../Include")
shelltools.cd("../AMD/Lib")
autotools.make()
shelltools.cd("../../Lib")
shelltools.system("gcc -shared -Wl,-soname,libamd.so.%s -o \
libamd.so.%s ../AMD/Lib/*.o -lm -lrt" % (amd_version_major, amd_version))
shelltools.sym("libamd.so.%s" % amd_version, "libamd.so.%s" % amd_version_major)
shelltools.sym("libamd.so.%s" % amd_version, "libamd.so")
shelltools.copy("../AMD/Lib/*.a", ".")
shelltools.cd("../AMD")
shelltools.copy("Include/*.h", "../Include")
for d in ("README.txt", "Doc/License", "Doc/ChangeLog", "Doc/*.pdf"):
shelltools.copy(d, "../Doc/AMD")
shelltools.cd("../BTF/Lib")
autotools.make()
shelltools.cd("../../Lib")
shelltools.system("gcc -shared -Wl,-soname,libbtf.so.%s -o \
libbtf.so.%s ../BTF/Lib/*.o" % (btf_version_major, btf_version))
shelltools.sym("libbtf.so.%s" % btf_version, "libbtf.so.%s" % btf_version_major)
shelltools.sym("libbtf.so.%s" % btf_version, "libbtf.so")
shelltools.copy("../BTF/Lib/*.a", ".")
shelltools.cd("../BTF")
shelltools.copy("Include/*.h", "../Include")
for d in ("README.txt", "Doc/*"):
shelltools.copy(d, "../Doc/BTF")
shelltools.cd("../CAMD/Lib")
autotools.make()
shelltools.cd("../../Lib")
shelltools.system("gcc -shared -Wl,-soname,libcamd.so.%s -o \
libcamd.so.%s ../CAMD/Lib/*.o -lm" % (camd_version_major, camd_version))
shelltools.sym("libcamd.so.%s" % camd_version, "libcamd.so.%s" % camd_version_major)
shelltools.sym("libcamd.so.%s" % camd_version, "libcamd.so")
shelltools.copy("../CAMD/Lib/*.a", ".")
shelltools.cd("../CAMD")
shelltools.copy("Include/*.h", "../Include")
for d in ("README.txt", "Doc/ChangeLog", "Doc/License", "Doc/*.pdf"):
shelltools.copy(d, "../Doc/CAMD")
shelltools.cd("../CCOLAMD/Lib")
autotools.make()
shelltools.cd("../../Lib")
shelltools.system("gcc -shared -Wl,-soname,libccolamd.so.%s -o \
libccolamd.so.%s ../CCOLAMD/Lib/*.o -lm" % (ccolamd_version_major, ccolamd_version))
shelltools.sym("libccolamd.so.%s" % ccolamd_version, "libccolamd.so.%s" % ccolamd_version_major)
shelltools.sym("libccolamd.so.%s" % ccolamd_version, "libccolamd.so")
shelltools.copy("../CCOLAMD/Lib/*.a", ".")
shelltools.cd("../CCOLAMD")
shelltools.copy("Include/*.h", "../Include")
for d in ("README.txt", "Doc/*"):
shelltools.copy(d, "../Doc/CCOLAMD")
shelltools.cd("../COLAMD/Lib")
autotools.make()
shelltools.cd("../../Lib")
shelltools.system("gcc -shared -Wl,-soname,libcolamd.so.%s -o \
libcolamd.so.%s ../COLAMD/Lib/*.o -lm" % (colamd_version_major, colamd_version))
shelltools.sym("libcolamd.so.%s" % colamd_version, "libcolamd.so.%s" % colamd_version_major)
shelltools.sym("libcolamd.so.%s" % colamd_version, "libcolamd.so")
shelltools.copy("../COLAMD/Lib/*.a", ".")
shelltools.cd("../COLAMD")
shelltools.copy("Include/*.h", "../Include")
for d in ("README.txt", "Doc/*"):
shelltools.copy(d, "../Doc/COLAMD")
shelltools.cd("../CHOLMOD/Lib")
autotools.make("-I/usr/include/metis")
shelltools.cd("../../Lib")
shelltools.system("gcc -shared -Wl,-soname,libcholmod.so.%s -o \
libcholmod.so.%s ../CHOLMOD/Lib/*.o \
-L/usr/lib/atlas -llapack libamd.so.%s \
libcamd.so.%s libcolamd.so.%s \
libccolamd.so.%s \
libsuitesparseconfig.so.%s \
-lm" % (cholmod_version_major,
cholmod_version,
amd_version_major,
camd_version_major, colamd_version_major,
ccolamd_version_major,
SuiteSparse_config_major))
shelltools.sym("libcholmod.so.%s" % cholmod_version, "libcholmod.so.%s" % cholmod_version_major)
shelltools.sym("libcholmod.so.%s" % cholmod_version, "libcholmod.so")
shelltools.copy("../CHOLMOD/Lib/*.a", ".")
shelltools.cd("../CHOLMOD")
shelltools.copy("Include/*.h", "../Include")
shelltools.copy("README.txt", "../Doc/CHOLMOD")
shelltools.copy("Doc/*.pdf", "../Doc/CHOLMOD")
shelltools.copy("Cholesky/License.txt", "../Doc/CHOLMOD/Cholesky_License.txt")
shelltools.copy("Core/License.txt", "../Doc/CHOLMOD/Core_License.txt")
shelltools.copy("MatrixOps/License.txt", "../Doc/CHOLMOD/MatrixOps_License.txt")
shelltools.copy("Partition/License.txt", "../Doc/CHOLMOD/Partition_License.txt")
shelltools.copy("Supernodal/License.txt", "../Doc/CHOLMOD/Supernodal_License.txt")
shelltools.cd("../CSparse/Include")
shelltools.copy("cs.h", "../../Include")
shelltools.cd("../Lib")
autotools.make()
shelltools.cd("../../Lib")
shelltools.system("gcc -shared -Wl,-soname,libcsparse.so.%s -o \
libcsparse.so.%s ../CSparse/Lib/*.o -lm" % (csparse_version_major, csparse_version))
shelltools.sym("libcsparse.so.%s" % csparse_version, "libcsparse.so.%s" % csparse_version_major)
shelltools.sym("libcsparse.so.%s" % csparse_version, "libcsparse.so")
shelltools.copy("../CSparse/Lib/*.a", ".")
shelltools.cd("../CSparse")
shelltools.copy("Doc/*", "../Doc/CSparse")
shelltools.cd("../KLU/Lib")
autotools.make()
shelltools.cd("../../Lib")
shelltools.system("gcc -shared -Wl,-soname,libklu.so.%s -o \
libklu.so.%s ../KLU/Lib/*.o \
libamd.so.%s libcolamd.so.%s \
libbtf.so.%s libcholmod.so.%s \
libsuitesparseconfig.so.%s \
" % (klu_version_major,
klu_version,
amd_version_major, colamd_version_major,
btf_version_major, cholmod_version_major,
SuiteSparse_config_major))
shelltools.sym("libklu.so.%s" % klu_version, "libklu.so.%s" % klu_version_major)
shelltools.sym("libklu.so.%s" % klu_version, "libklu.so")
shelltools.copy("../KLU/Lib/*.a", ".")
shelltools.cd("../KLU")
shelltools.copy("Include/*.h", "../Include")
for d in "README.txt Doc/lesser.txt".split(" "):
shelltools.copy(d, "../Doc/KLU")
shelltools.cd("../LDL/Lib")
autotools.make()
shelltools.cd("../../Lib")
shelltools.system("gcc -shared -Wl,-soname,libldl.so.%s -o \
libldl.so.%s ../LDL/Lib/*.o" % (ldl_version_major, ldl_version))
shelltools.sym("libldl.so.%s" % ldl_version, "libldl.so.%s" % ldl_version_major)
shelltools.sym("libldl.so.%s" % ldl_version, "libldl.so")
shelltools.copy("../LDL/Lib/*.a", ".")
shelltools.cd("../LDL")
shelltools.copy("Include/*.h", "../Include")
for d in "README.txt Doc/ChangeLog Doc/lesser.txt Doc/*.pdf".split(" "):
shelltools.copy(d, "../Doc/LDL")
shelltools.cd("../UMFPACK/Lib")
autotools.make()
shelltools.cd("../../Lib")
shelltools.system("gcc -shared -Wl,-soname,libumfpack.so.%s -o \
libumfpack.so.%s ../UMFPACK/Lib/*.o \
-L/usr/lib/atlas -llapack libamd.so.%s \
libcholmod.so.%s \
libsuitesparseconfig.so.%s \
-lm" % (umfpack_version_major,
umfpack_version,
amd_version_major,
cholmod_version_major,
SuiteSparse_config_major))
shelltools.sym("libumfpack.so.%s" % umfpack_version, "libumfpack.so.%s" % umfpack_version_major)
shelltools.sym("libumfpack.so.%s" % umfpack_version, "libumfpack.so")
shelltools.copy("../UMFPACK/Lib/*.a", ".")
shelltools.cd("../UMFPACK")
shelltools.copy("Include/*.h", "../Include")
for d in "README.txt Doc/License Doc/ChangeLog Doc/gpl.txt Doc/*.pdf".split(" "):
shelltools.copy(d, "../Doc/UMFPACK")
shelltools.cd("../SPQR/Lib")
autotools.make('CXXFLAS="%s -DNPARTITION -fPIC -O3"' % get.CXXFLAGS())
shelltools.cd("../../Lib")
shelltools.system("g++ -shared -Wl,-soname,libspqr.so.%s -o \
libspqr.so.%s ../SPQR/Lib/*.o \
-L/usr/lib/atlas -L/usr/lib -llapack \
libcholmod.so.%s \
libsuitesparseconfig.so.%s \
-lm" % (spqr_version_major,
spqr_version,
cholmod_version_major,
SuiteSparse_config_major))
shelltools.sym("libspqr.so.%s" % spqr_version, "libspqr.so.%s" % spqr_version_major)
shelltools.sym("libspqr.so.%s" % spqr_version, "libspqr.so")
shelltools.copy("../SPQR/Lib/*.a", ".")
shelltools.cd("../SPQR")
shelltools.copy("Include/*.h*", "../Include")
shelltools.copy("README.txt", "README_SPQR.txt")
shelltools.copy("README_SPQR.txt", "../Doc/SPQR")
shelltools.copy("Doc/*", "../Doc/SPQR")
shelltools.cd("../RBio/Lib")
autotools.make()
shelltools.cd("../../Lib")
shelltools.system("gcc -shared -Wl,-soname,librbio.so.%s -o \
librbio.so.%s ../RBio/Lib/*.o \
libsuitesparseconfig.so.%s" % (rbio_version_major, rbio_version, SuiteSparse_config_major))
shelltools.sym("librbio.so.%s" % rbio_version, "librbio.so.%s" % rbio_version_major)
shelltools.sym("librbio.so.%s" % rbio_version, "librbio.so")
shelltools.copy("../RBio/Lib/*.a", ".")
shelltools.cd("../RBio")
shelltools.copy("Include/*.h", "../Include")
for d in "README.txt Doc/ChangeLog Doc/License.txt".split(" "):
shelltools.copy(d, "../Doc/RBio")
shelltools.system("BLAS=-lblas LAPACK=-llapack TBB=-ltbb SPQR_CONFIG=-DHAVE_TBB MY_METIS_LIB=/usr/lib/libmetis.so make")
def install():
pisitools.insinto("/usr/include/%s" % get.srcNAME().lower(), "Include/*.h")
pisitools.dodoc("README.txt")
shelltools.copy("Doc/*", "%s/usr/share/doc/%s" % (get.installDIR(), get.srcNAME()))
shelltools.cd("Lib")
for l in shelltools.ls("*.so*"):
pisitools.insinto("/usr/lib", l)
for l in shelltools.ls("*.a"):
pisitools.insinto("/usr/lib", l)
shelltools.system("BLAS=-lblas LAPACK=-llapack TBB=-ltbb SPQR_CONFIG=-DHAVE_TBB MY_METIS_LIB=/usr/lib/libmetis.so \
make INSTALL_LIB=%s/usr/lib INSTALL_INCLUDE=%s/usr/include install" % (get.installDIR(), get.installDIR()))
# fix rpath
shelltools.system("chrpath -d %s/usr/lib/*" % get.installDIR())
pisitools.dodoc("LICENSE*", "README*")
science/mathematics/SuiteSparse/files/suitesparse-no-demo.patch
+11
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@@ -0,0 +1,11 @@
--- SuiteSparse-5.6.0/Makefile.orig 2019-11-05 22:37:26.086135974 +0000
+++ SuiteSparse-5.6.0/Makefile 2019-11-05 22:37:37.549632429 +0000
@@ -12,7 +12,7 @@
# Compile the default rules for each package
go: metis
( cd SuiteSparse_config && $(MAKE) )
- ( cd Mongoose && $(MAKE) CMAKE_OPTIONS='$(CMAKE_OPTIONS)' )
+ ( cd Mongoose && $(MAKE) library CMAKE_OPTIONS='$(CMAKE_OPTIONS)' )
( cd AMD && $(MAKE) )
( cd BTF && $(MAKE) )
( cd CAMD && $(MAKE) )
science/mathematics/SuiteSparse/pspec.xml
+25 -18
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@@ -1,34 +1,41 @@
<?xml version="1.0" ?>
<!DOCTYPE PISI SYSTEM "http://www.pisilinux.org/projeler/pisi/pisi-spec.dtd">
<!DOCTYPE PISI SYSTEM "https://www.pisilinux.org/projeler/pisi/pisi-spec.dtd">
<PISI>
<Source>
<Name>SuiteSparse</Name>
<Homepage>http://www.cise.ufl.edu/research/sparse</Homepage>
<Homepage>http://faculty.cse.tamu.edu/davis/suitesparse.html</Homepage>
<Packager>
<Name>PisiLinux Community</Name>
<Email>admins@pisilinux.org</Email>
<Name>Pisi Linux Community</Name>
<Email>admin@pisilinux.org</Email>
</Packager>
<License>LGPLv2.1</License>
<License>GPLv2</License>
<PartOf>science.mathematics</PartOf>
<License>GPL</License>
<IsA>library</IsA>
<Summary>Sparse matrix library</Summary>
<Summary>SuiteSparse, a suite of Sparse matrix software</Summary>
<Description>SuiteSparse is a single archive that contains sparse matrix libraries.</Description>
<Archive sha1sum="13f5d8caa8df92a4d704426781365e55c09baf01" type="targz">http://faculty.cse.tamu.edu/davis/SuiteSparse/SuiteSparse-4.4.4.tar.gz</Archive>
<Archive sha1sum="ccc50177425d0d9bfe878786b8f2729c247efa90" type="targz">https://github.com/DrTimothyAldenDavis/SuiteSparse/archive/v5.7.2.tar.gz</Archive>
<BuildDependencies>
<Dependency>lapack-devel</Dependency>
<Dependency>cmake</Dependency>
<Dependency>blas-devel</Dependency>
<Dependency>libgcc</Dependency>
<Dependency>metis-devel</Dependency>
<Dependency>libquadmath</Dependency>
<Dependency>lapack-devel</Dependency>
<Dependency>intel-tbb-devel</Dependency>
</BuildDependencies>
<Patches>
<Patch>suitesparse-no-demo.patch</Patch>
</Patches>
</Source>
<Package>
<Name>SuiteSparse</Name>
<Summary>SuiteSparse, a suite of Sparse matrix software</Summary>
<RuntimeDependencies>
<Dependency>lapack</Dependency>
<Dependency>blas</Dependency>
<Dependency>libgcc</Dependency>
<Dependency>metis</Dependency>
<Dependency>lapack</Dependency>
<Dependency>libgomp</Dependency>
<Dependency>intel-tbb</Dependency>
</RuntimeDependencies>
<Files>
<Path fileType="library">/usr/lib</Path>
@@ -49,11 +56,11 @@
<History>
<Update release="4">
<Date>2018-09-07</Date>
<Version>4.4.4</Version>
<Comment>Rebuild with new toolchain</Comment>
<Name>Pisi Linux Community</Name>
<Email>admin@pisilinux.org</Email>
<Date>2020-05-24</Date>
<Version>5.7.2</Version>
<Comment>Major Version Bump</Comment>
<Name>Blue Devil</Name>
<Email>bluedevil@sctzine.com</Email>
</Update>
<Update release="3">
<Date>2017-04-24</Date>
@@ -77,4 +84,4 @@
<Email>ayhanyalcinsoy@pisilinux.org</Email>
</Update>
</History>
</PISI>
</PISI>
science/mathematics/SuiteSparse/translations.xml
+3 -2
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@@ -3,12 +3,13 @@
<Source>
<Name>SuiteSparse</Name>
<Summary xml:lang="tr">Sparse matrix kütüphanesi</Summary>
<Description xml:lang="tr">Sparse matrix kütüphanesi.</Description>
<Description xml:lang="tr">SuiteSparse, Sparse matrix kütüphanesi içerir.</Description>
<Description xml:lang="fr">Librairie de matrices Sparse.</Description>
</Source>
<Package>
<Name>SuiteSparse-devel</Name>
<Summary xml:lang="tr">SuiteSparse için geliştirme dosyaları</Summary>
<Description xml:lang="tr">SuiteSparse-devel, SuiteSparse için geliştirme dosyalarını içerir.</Description>
</Package>
</PISI>
</PISI>